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​Molecular bases of plant developmental phase transitions​

​Molecular bases of plant developmental phase transitions​

Our research focuses on understanding the molecular mechanisms involved in the regulation of plant developmental phase transitions such as flowering initiation and seed dormancy breaking that have high adaptive value for plant species and direct impact on crop yield

Grupo de investigación dependiente del

Centre for Plant Biotechnology and Genomics (CBGP; UPM-INIA) and Department of Biotechnology of INIA

During their life cycle plants undergo a number of developmental phases, including embryonic, vegetative and reproductive development. These developmental stages are characterized by specific patterns of cellular differentiation. The switch from a developmental phase to the next is under the control of spatial and temporal patterns of gene expression, so that selective activation or silencing of genes directs plant development through different phase changes. The right timing for the developmental transitions is essential for optimal crop yield and also for fitness of plant species. In particular, we are interested in phase transitions such as flowering initiation which is essential for plant reproductive success and has high adaptive value for plant species, as well as a significant impact on crop yield. Our interest is to understand the regulatory mechanisms driving these developmental processes and contribute to secure sustainable crop production, a key challenge faced by agriculture nowadays in the current scenario of climate change and global warming.

​Investigation

The floral transition marks the initiation of reproductive development and the timing of this developmental switch is essential to determine the production of fruits and seeds and, therefore, the reproductive success of plant species. For that reason, plants tune very precisely the time of flowering initiation in response to both endogenous and environmental factors. Using the model plant species Arabidopsis thaliana, and related Brassicaceae crop species, during the last five years we have investigated several molecular mechanisms involved in the control of flowering.

Chromatin-mediated regulation of flowering time

Chromatin remodeling processes play essential roles in the establishment and maintenance of gene expression patterns that drive plant developmental transitions. For that reason, one of our main interests is to analyse the involvement of epigenetic processes in the control of flowering time. In this context, we have functionally characterized two homologous plant specific proteins, EBS and SHL, which contain functional domains that specifically recognize histone posttranslational modifications. Both proteins interact with chromatin remodelling complexes to repress the initiation of flowering by directly repressing the expression of master genes that function as flowering switches.

Additionally, we have established a conceptual model for the reestablishment of epigenetic marks following DNA replication in plants. Using flowering time in Arabidopsis as experimental system we have revealed a role for the DNA polymerase ϵ ESD7 in the maintenance of repressor marks in the chromatin through the interaction with Polycomb Group (PcG) proteins, showing the involvement of this DNA polymerase in the transcriptional silencing of key flowering genes by participating in the recruitment of these repressor complexes of gene expression.

Our work in the last few years has also unveiled the involvement of the SWR1-mediated exchange of non-canonical histone variants such as H2A.Z in the control of flowering time. Our characterization of several subunits of the SWR1 complex has demonstrated that this complex is a central player in the repression of flowering. Some of the subunits of this complex are shared with NuA4, a histone acetyltransferase complex functionally related to SWR1, prompting us to explore the involvement of NuA4 in the regulation of the floral transition, one of our current research interests. Our observations show that several subunits of this acetyltransferase complex are also required for proper control of flowering time.

Involvement of selective protein degradation in flowering time regulation

Our characterization of Arabidopsis mutants with altered flowering time allowed us to reveal the participation of selective protein degradation in the regulation of the photoperiodic flowering response. We have shown that the E3 ubiquitin ligase HOS1/ESD6 is necessary to modulate the stability of proteins that play essential roles in the daylength perception and the control of flowering time in response to photoperiod. In addition, our data are indicative that photoreceptors are also involved in this response, confirming that integration of light signals with selective protein degradation machinery is central to the regulation of plant development and particularly the floral transition.

Flowering response to temperatura in Brassica crops

Nowadays agriculture faces the challenge of securing stable and sustainable crop production in a fluctuating environment. Crop yield depends on the adaptive response of key developmental traits to varying environmental conditions due to climate change. In this context, our laboratory is focused on understanding the mechanisms that mediate the flowering response to high ambient temperature of Brassica crops. We are currently analysing the influence of increased temperature in the flowering time of these crops and the epigenetic mechanisms that mediate this response in crop species such as B. napus, B. rapa and B. oleracea.

The research line of the Ramón y Cajal researcher Pedro Crevillén is described in his web page.

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